Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs35781323 chr6:28144832 T/C 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs35806480 chr5:176634152 G/A 2.34E-8 287 25.78 25.7 4.93 KM Plot
KIRP rs35819751 chr6:27810569 A/G 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs35827677 chr4:177245488 T/G 2.85E-5 281 25.63 28.17 23.23 KM Plot
KIRP rs35848276 chr6:27521096 C/T 1.56E-8 286 25.58 29.2 9.77 KM Plot
KIRP rs35866011 chr2:128501458 C/T 1.33E-6 285 25.97 21.67 8.47 KM Plot
KIRP rs35883476 chr6:28368508 G/C 2.0E-8 284 25.57 26.38 9.77 KM Plot
KIRP rs35902873 chr6:28058949 G/C 2.05E-8 288 25.6 27.8 9.77 KM Plot
KIRP rs35928235 chr12:49899789 C/CAT 5.89E-6 282 25.82 34.97 10.97 KM Plot
KIRP rs35952432 chr6:28074901 C/T 1.77E-8 286 25.6 29.43 9.77 KM Plot
KIRP rs35987986 chr16:89576016 A/T 0.000162 284 25.62 26.6 15.15 KM Plot
KIRP rs36001488 chr2:234185267 C/T 6.17E-5 288 25.08 26.77 23.23 KM Plot
KIRP rs36005309 chr6:28277346 AT/A 0 289 25.6 26.58 9.38 KM Plot
KIRP rs36071140 chr2:100926623 C/CT 9.23E-5 284 27.43 25.7 25.15 KM Plot
KIRP rs36092177 chr6:28357807 C/T 2.0E-8 284 25.58 26.37 9.77 KM Plot